IL_8OIQ_040

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAUAAUCACUUG*CUUG

Length

16 nucleotides

Bulged bases

8OIQ|1|B8|A|933, 8OIQ|1|B8|U|939, 8OIQ|1|B8|U|958

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|C|929
8OIQ|1|B8|A|930
8OIQ|1|B8|U|931
8OIQ|1|B8|A|932
8OIQ|1|B8|A|933
8OIQ|1|B8|U|934
8OIQ|1|B8|C|935
8OIQ|1|B8|A|936
8OIQ|1|B8|C|937
8OIQ|1|B8|U|938
8OIQ|1|B8|U|939
8OIQ|1|B8|G|940
*
8OIQ|1|B8|C|956
8OIQ|1|B8|U|957
8OIQ|1|B8|U|958
8OIQ|1|B8|G|959

Current chains

Chain B8

16S rRNA

Nearby chains

Chain AG

P-site Met-tRNA(fMet)

Chain Aa

Peptide chain release factor 1, mitochondrial