IL_8OIT_003

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAAACC*GAUGAAAAAUUAUAACCAAG

Length

27 nucleotides

Bulged bases

8OIT|1|B8|A|134, 8OIT|1|B8|U|137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|C|2
8OIT|1|B8|U|3
8OIT|1|B8|A|4
8OIT|1|B8|A|5
8OIT|1|B8|A|6
8OIT|1|B8|C|7
8OIT|1|B8|C|8
*
8OIT|1|B8|G|127
8OIT|1|B8|A|128
8OIT|1|B8|U|129
8OIT|1|B8|G|130
8OIT|1|B8|A|131
8OIT|1|B8|A|132
8OIT|1|B8|A|133
8OIT|1|B8|A|134
8OIT|1|B8|A|135
8OIT|1|B8|U|136
8OIT|1|B8|U|137
8OIT|1|B8|A|138
8OIT|1|B8|U|139
8OIT|1|B8|A|140
8OIT|1|B8|A|141
8OIT|1|B8|C|142
8OIT|1|B8|C|143
8OIT|1|B8|A|144
8OIT|1|B8|A|145
8OIT|1|B8|G|146

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BA

39S ribosomal protein L22, mitochondrial

Chain BB

39S ribosomal protein L23, mitochondrial

Chain BC

39S ribosomal protein L24, mitochondrial

Chain BF

39S ribosomal protein L47, mitochondrial

Chain BH

39S ribosomal protein L32, mitochondrial

Chain BY

39S ribosomal protein L20, mitochondrial

Chain Bt

39S ribosomal protein L44, mitochondrial

Chain Bu

39S ribosomal protein L45, mitochondrial

Chain Bz

39S ribosomal protein L51, mitochondrial