IL_8OIT_007
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIT_007 not in the Motif Atlas
- Geometric match to IL_4E59_001
- Geometric discrepancy: 0.1264
- The information below is about IL_4E59_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
8OIT|1|B8|U|207
8OIT|1|B8|U|208
8OIT|1|B8|G|209
*
8OIT|1|B8|C|225
8OIT|1|B8|U|226
8OIT|1|B8|A|227
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BK
- 39S ribosomal protein L35, mitochondrial
- Chain BN
- 39S ribosomal protein L4, mitochondrial
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
- Chain Bx
- 39S ribosomal protein L49, mitochondrial
- Chain Bz
- 39S ribosomal protein L51, mitochondrial
Coloring options: