IL_8OIT_022
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 8OIT|1|B8|A|528
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIT_022 not in the Motif Atlas
- Homologous match to IL_6PRV_002
- Geometric discrepancy: 0.1887
- The information below is about IL_6PRV_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIT|1|B8|G|527
8OIT|1|B8|A|528
8OIT|1|B8|A|529
8OIT|1|B8|A|530
*
8OIT|1|B8|U|541
8OIT|1|B8|C|542
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BQ
- 39S ribosomal protein L11, mitochondrial
- Chain Bb
- 39S ribosomal protein L53, mitochondrial
- Chain Bc
- 39S ribosomal protein L54, mitochondrial
- Chain Bl
- 39S ribosomal protein L36, mitochondrial
Coloring options: