IL_8OIT_029
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 8OIT|1|B8|G|985
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIT_029 not in the Motif Atlas
- Geometric match to IL_5J7L_307
- Geometric discrepancy: 0.1011
- The information below is about IL_5J7L_307
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
8OIT|1|B8|A|803
8OIT|1|B8|C|804
8OIT|1|B8|U|805
8OIT|1|B8|C|806
8OIT|1|B8|G|807
8OIT|1|B8|G|808
*
8OIT|1|B8|C|983
8OIT|1|B8|U|984
8OIT|1|B8|G|985
8OIT|1|B8|U|986
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BM
- 39S ribosomal protein L3, mitochondrial
- Chain BS
- 39S ribosomal protein L14, mitochondrial
- Chain BX
- 39S ribosomal protein L19, mitochondrial
Coloring options: