IL_8OIT_050

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGG*C(PSU)GA

Length

7 nucleotides

Bulged bases

8OIT|1|B8|G|1398

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OIT_050 not in the Motif Atlas

Homologous match to IL_5J7L_339

Geometric discrepancy: 0.1735

The information below is about IL_5J7L_339

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|U|1324
8OIT|1|B8|G|1325
8OIT|1|B8|G|1326
*
8OIT|1|B8|C|1396
8OIT|1|B8|PSU|1397
8OIT|1|B8|G|1398
8OIT|1|B8|A|1399

Current chains

Chain B8

16S rRNA

Nearby chains

Chain Aa

Peptide chain release factor 1, mitochondrial

Chain BM

39S ribosomal protein L3, mitochondrial