IL_8OIT_051
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUC*GUGAU
- Length
- 8 nucleotides
- Bulged bases
- 8OIT|1|B8|G|1393, 8OIT|1|B8|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIT_051 not in the Motif Atlas
- Homologous match to IL_7RQB_097
- Geometric discrepancy: 0.1357
- The information below is about IL_7RQB_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_90933.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
8OIT|1|B8|A|1327
8OIT|1|B8|U|1328
8OIT|1|B8|C|1329
*
8OIT|1|B8|G|1391
8OIT|1|B8|U|1392
8OIT|1|B8|G|1393
8OIT|1|B8|A|1394
8OIT|1|B8|U|1395
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain Aa
- Peptide chain release factor 1, mitochondrial
- Chain BH
- 39S ribosomal protein L32, mitochondrial
- Chain BM
- 39S ribosomal protein L3, mitochondrial
Coloring options: