IL_8OIT_055
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8OIT|1|B8|A|1419
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIT_055 not in the Motif Atlas
- Homologous match to IL_7RQB_101
- Geometric discrepancy: 0.3965
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
8OIT|1|B8|C|1408
8OIT|1|B8|G|1409
*
8OIT|1|B8|C|1418
8OIT|1|B8|A|1419
8OIT|1|B8|G|1420
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain AG
- P-site Met-tRNA(Met)
- Chain Aa
- Peptide chain release factor 1, mitochondrial
- Chain BD
- 39S ribosomal protein L27, mitochondrial
- Chain BL
- 39S ribosomal protein L2, mitochondrial
Coloring options: