IL_8OIT_062

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCCCA*UACCCUCAC

Length

14 nucleotides

Bulged bases

8OIT|1|B8|C|744, 8OIT|1|B8|C|745, 8OIT|1|B8|U|746, 8OIT|1|B8|C|747

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|G|707
8OIT|1|B8|C|708
8OIT|1|B8|C|709
8OIT|1|B8|C|710
8OIT|1|B8|A|711
*
8OIT|1|B8|U|741
8OIT|1|B8|A|742
8OIT|1|B8|C|743
8OIT|1|B8|C|744
8OIT|1|B8|C|745
8OIT|1|B8|U|746
8OIT|1|B8|C|747
8OIT|1|B8|A|748
8OIT|1|B8|C|749

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BB

39S ribosomal protein L23, mitochondrial

Chain Bi

39S ribosomal protein S30, mitochondrial

Chain Bm

39S ribosomal protein L37, mitochondrial

Chain Bq

39S ribosomal protein L41, mitochondrial