IL_8OIT_066

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACCUAACAAA*UCCUAAACU

Length

19 nucleotides

Bulged bases

8OIT|1|B8|A|1094, 8OIT|1|B8|A|1097, 8OIT|1|B8|U|1111, 8OIT|1|B8|A|1112

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|A|1090
8OIT|1|B8|C|1091
8OIT|1|B8|C|1092
8OIT|1|B8|U|1093
8OIT|1|B8|A|1094
8OIT|1|B8|A|1095
8OIT|1|B8|C|1096
8OIT|1|B8|A|1097
8OIT|1|B8|A|1098
8OIT|1|B8|A|1099
*
8OIT|1|B8|U|1108
8OIT|1|B8|C|1109
8OIT|1|B8|C|1110
8OIT|1|B8|U|1111
8OIT|1|B8|A|1112
8OIT|1|B8|A|1113
8OIT|1|B8|A|1114
8OIT|1|B8|C|1115
8OIT|1|B8|U|1116

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BO

39S ribosomal protein L9, mitochondrial

Chain Bj

39S ribosomal protein L1, mitochondrial