IL_8OLV_012

3D structure

PDB id

8OLV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and ARN25850

Experimental method

X-RAY DIFFRACTION

Resolution

2.81 Å

Loop

Sequence

GAGGU*AAGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLV|1|A|G|267
8OLV|1|A|A|268
8OLV|1|A|G|269
8OLV|1|A|G|270
8OLV|1|A|U|271
*
8OLV|1|A|A|282
8OLV|1|A|A|283
8OLV|1|A|G|284
8OLV|1|A|U|285
8OLV|1|A|C|286

Current chains

Chain A

Group IIC intron

Nearby chains