IL_8OLW_013

3D structure

PDB id

8OLW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UAGUAC*GGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLW|1|A|U|298
8OLW|1|A|A|299
8OLW|1|A|G|300
8OLW|1|A|U|301
8OLW|1|A|A|302
8OLW|1|A|C|303
*
8OLW|1|A|G|316
8OLW|1|A|G|317
8OLW|1|A|A|318
8OLW|1|A|A|319
8OLW|1|A|G|320

Current chains

Chain A

Group IIC intron

Nearby chains