IL_8OLW_017

3D structure

PDB id

8OLW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UAGGU*ACAGA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLW|1|A|U|158
8OLW|1|A|A|159
8OLW|1|A|G|160
8OLW|1|A|G|161
8OLW|1|A|U|162
*
8OLW|1|A|A|215
8OLW|1|A|C|216
8OLW|1|A|A|217
8OLW|1|A|G|218
8OLW|1|A|A|219

Current chains

Chain A

Group IIC intron

Nearby chains