IL_8OLW_018

3D structure

PDB id

8OLW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

AUAUGAGG*UAAAU

Length

13 nucleotides

Bulged bases

8OLW|1|A|U|152, 8OLW|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLW|1|A|A|149
8OLW|1|A|U|150
8OLW|1|A|A|151
8OLW|1|A|U|152
8OLW|1|A|G|153
8OLW|1|A|A|154
8OLW|1|A|G|155
8OLW|1|A|G|156
*
8OLW|1|A|U|221
8OLW|1|A|A|222
8OLW|1|A|A|223
8OLW|1|A|A|224
8OLW|1|A|U|225

Current chains

Chain A

Group IIC intron

Nearby chains