IL_8OLY_010

3D structure

PDB id

8OLY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron post first step of splicing in the presence of K+, Mg2+ and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

UG*CUUUCUGCCAAAG

Length

15 nucleotides

Bulged bases

8OLY|1|A|A|207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLY|1|A|U|168
8OLY|1|A|G|169
*
8OLY|1|A|C|197
8OLY|1|A|U|198
8OLY|1|A|U|199
8OLY|1|A|U|200
8OLY|1|A|C|201
8OLY|1|A|U|202
8OLY|1|A|G|203
8OLY|1|A|C|204
8OLY|1|A|C|205
8OLY|1|A|A|206
8OLY|1|A|A|207
8OLY|1|A|A|208
8OLY|1|A|G|209

Current chains

Chain A

Group IIC intron

Nearby chains