IL_8OLY_012

3D structure

PDB id

8OLY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron post first step of splicing in the presence of K+, Mg2+ and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

GAGGU*AAGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLY|1|A|G|267
8OLY|1|A|A|268
8OLY|1|A|G|269
8OLY|1|A|G|270
8OLY|1|A|U|271
*
8OLY|1|A|A|282
8OLY|1|A|A|283
8OLY|1|A|G|284
8OLY|1|A|U|285
8OLY|1|A|C|286

Current chains

Chain A

Group IIC intron

Nearby chains