IL_8OLZ_006

3D structure

PDB id

8OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

GAGGAACACGAAC*GC

Length

15 nucleotides

Bulged bases

8OLZ|1|A|A|137, 8OLZ|1|A|A|138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLZ|1|A|G|133
8OLZ|1|A|A|134
8OLZ|1|A|G|135
8OLZ|1|A|G|136
8OLZ|1|A|A|137
8OLZ|1|A|A|138
8OLZ|1|A|C|139
8OLZ|1|A|A|140
8OLZ|1|A|C|141
8OLZ|1|A|G|142
8OLZ|1|A|A|143
8OLZ|1|A|A|144
8OLZ|1|A|C|145
*
8OLZ|1|A|G|229
8OLZ|1|A|C|230

Current chains

Chain A

DOMAINS 1-5

Nearby chains