IL_8OLZ_007

3D structure

PDB id

8OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

AUAUGAGG*UAAAU

Length

13 nucleotides

Bulged bases

8OLZ|1|A|U|152, 8OLZ|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLZ|1|A|A|149
8OLZ|1|A|U|150
8OLZ|1|A|A|151
8OLZ|1|A|U|152
8OLZ|1|A|G|153
8OLZ|1|A|A|154
8OLZ|1|A|G|155
8OLZ|1|A|G|156
*
8OLZ|1|A|U|221
8OLZ|1|A|A|222
8OLZ|1|A|A|223
8OLZ|1|A|A|224
8OLZ|1|A|U|225

Current chains

Chain A

DOMAINS 1-5

Nearby chains

Chain B

5'-exon