IL_8OM0_019

3D structure

PDB id

8OM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+ and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

3.61 Å

Loop

Sequence

UG*CUUUCUGCCAAAG

Length

15 nucleotides

Bulged bases

8OM0|1|A|A|207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OM0|1|A|U|168
8OM0|1|A|G|169
*
8OM0|1|A|C|197
8OM0|1|A|U|198
8OM0|1|A|U|199
8OM0|1|A|U|200
8OM0|1|A|C|201
8OM0|1|A|U|202
8OM0|1|A|G|203
8OM0|1|A|C|204
8OM0|1|A|C|205
8OM0|1|A|A|206
8OM0|1|A|A|207
8OM0|1|A|A|208
8OM0|1|A|G|209

Current chains

Chain A

Domains 1-5

Nearby chains