IL_8OO0_023

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCAUC*GUGCA

Length

10 nucleotides

Bulged bases

8OO0|1|1|C|469

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|U|447
8OO0|1|1|C|448
8OO0|1|1|A|449
8OO0|1|1|U|450
8OO0|1|1|C|451
*
8OO0|1|1|G|466
8OO0|1|1|U|467
8OO0|1|1|G|468
8OO0|1|1|C|469
8OO0|1|1|A|470

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein l7-like protein

Chain Lq

Putative 60S ribosomal protein