IL_8OO0_041

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACCUUC*GUAUC

Length

12 nucleotides

Bulged bases

8OO0|1|1|A|1086, 8OO0|1|1|U|1087

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|G|958
8OO0|1|1|A|959
8OO0|1|1|C|960
8OO0|1|1|C|961
8OO0|1|1|U|962
8OO0|1|1|U|963
8OO0|1|1|C|964
*
8OO0|1|1|G|1084
8OO0|1|1|U|1085
8OO0|1|1|A|1086
8OO0|1|1|U|1087
8OO0|1|1|C|1088

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LF

60S ribosomal protein l7-like protein

Chain LQ

Ribosomal protein L18-like protein

Chain Lb

60S ribosomal protein L29