IL_8OO0_091

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGG*CGGUUAAC

Length

11 nucleotides

Bulged bases

8OO0|1|1|A|2055

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|G|1932
8OO0|1|1|G|1933
8OO0|1|1|G|1934
*
8OO0|1|1|C|2050
8OO0|1|1|G|2051
8OO0|1|1|G|2052
8OO0|1|1|U|2053
8OO0|1|1|U|2054
8OO0|1|1|A|2055
8OO0|1|1|A|2056
8OO0|1|1|C|2057

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LR

Ribosomal protein L19

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11-like protein