IL_8OO0_119
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OO0_119 not in the Motif Atlas
- Homologous match to IL_8C3A_114
- Geometric discrepancy: 0.1335
- The information below is about IL_8C3A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8OO0|1|1|C|2794
8OO0|1|1|C|2795
8OO0|1|1|A|2796
8OO0|1|1|A|2797
8OO0|1|1|G|2798
*
8OO0|1|1|C|2808
8OO0|1|1|G|2809
8OO0|1|1|A|2810
8OO0|1|1|C|2811
8OO0|1|1|G|2812
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain LI
- 60S ribosomal protein L10-like protein
- Chain Lm
- Ubiquitin-like domain-containing protein
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