IL_8OO0_138

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUCCUC*GUAAUU

Length

13 nucleotides

Bulged bases

8OO0|1|1|A|3200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|A|3168
8OO0|1|1|U|3169
8OO0|1|1|U|3170
8OO0|1|1|C|3171
8OO0|1|1|C|3172
8OO0|1|1|U|3173
8OO0|1|1|C|3174
*
8OO0|1|1|G|3198
8OO0|1|1|U|3199
8OO0|1|1|A|3200
8OO0|1|1|A|3201
8OO0|1|1|U|3202
8OO0|1|1|U|3203

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LM

60S ribosomal protein L14-like protein

Chain Lf

60S ribosomal protein l33-like protein