IL_8OO0_192

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

8OO0|1|2|U|818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OO0_192 not in the Motif Atlas

Homologous match to IL_8C3A_434

Geometric discrepancy: 0.122

The information below is about IL_8C3A_434

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22551.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

9

Unit IDs

8OO0|1|2|G|817
8OO0|1|2|U|818
8OO0|1|2|G|819
*
8OO0|1|2|C|849
8OO0|1|2|C|850

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LR

Ribosomal protein L19

Chain SH

40S ribosomal protein S7