IL_8OO0_202
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGA*UGUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 8OO0|1|2|U|1094, 8OO0|1|2|U|1095, 8OO0|1|2|G|1097
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OO0_202 not in the Motif Atlas
- Homologous match to IL_8P9A_425
- Geometric discrepancy: 0.1678
- The information below is about IL_8P9A_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82706.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8OO0|1|2|C|1032
8OO0|1|2|G|1033
8OO0|1|2|A|1034
*
8OO0|1|2|U|1092
8OO0|1|2|G|1093
8OO0|1|2|U|1094
8OO0|1|2|U|1095
8OO0|1|2|U|1096
8OO0|1|2|G|1097
8OO0|1|2|G|1098
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2-like protein
- Chain SL
- 40S ribosomal protein S11-like protein
- Chain SN
- 40S ribosomal protein S13-like protein
- Chain SW
- 40S ribosomal protein S22-like protein
- Chain SX
- 40S ribosomal protein s23-like protein
- Chain Sb
- Ribosomal protein s27-like protein
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