IL_8OO0_267
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGACG*CCCUUGAAAAU
- Length
- 16 nucleotides
- Bulged bases
- 8OO0|1|1|C|1773, 8OO0|1|1|U|1774
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OO0|1|1|A|1634
8OO0|1|1|G|1635
8OO0|1|1|A|1636
8OO0|1|1|C|1637
8OO0|1|1|G|1638
*
8OO0|1|1|C|1771
8OO0|1|1|C|1772
8OO0|1|1|C|1773
8OO0|1|1|U|1774
8OO0|1|1|U|1775
8OO0|1|1|G|1776
8OO0|1|1|A|1777
8OO0|1|1|A|1778
8OO0|1|1|A|1779
8OO0|1|1|A|1780
8OO0|1|1|U|1781
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L2-like protein
- Chain Lg
- Ribosomal protein l34-like protein
- Chain Lp
- 60S ribosomal protein L43-like protein
- Chain Lr
- 60S ribosomal protein L41-A
Coloring options: