IL_8OO0_275

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUGA*UACCAC

Length

11 nucleotides

Bulged bases

8OO0|1|1|U|2373, 8OO0|1|1|A|2767

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|G|2372
8OO0|1|1|U|2373
8OO0|1|1|U|2374
8OO0|1|1|G|2375
8OO0|1|1|A|2376
*
8OO0|1|1|U|2766
8OO0|1|1|A|2767
8OO0|1|1|C|2768
8OO0|1|1|C|2769
8OO0|1|1|A|2770
8OO0|1|1|C|2771

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L2-like protein

Chain LC

60S ribosomal protein L4-like protein

Chain La

Ribosomal protein L18e/L15P domain-containing protein