IL_8OO0_279

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCUUG*UGAUCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|G|2782
8OO0|1|1|G|2783
8OO0|1|1|C|2784
8OO0|1|1|U|2785
8OO0|1|1|U|2786
8OO0|1|1|G|2787
*
8OO0|1|1|U|2821
8OO0|1|1|G|2822
8OO0|1|1|A|2823
8OO0|1|1|U|2824
8OO0|1|1|C|2825
8OO0|1|1|C|2826

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3-like protein

Chain LI

60S ribosomal protein L10-like protein

Chain Lb

60S ribosomal protein L29