IL_8OO0_281

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UACC*GGUAAG

Length

10 nucleotides

Bulged bases

8OO0|1|1|A|2870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|U|2850
8OO0|1|1|A|2851
8OO0|1|1|C|2852
8OO0|1|1|C|2853
*
8OO0|1|1|G|2866
8OO0|1|1|G|2867
8OO0|1|1|U|2868
8OO0|1|1|A|2869
8OO0|1|1|A|2870
8OO0|1|1|G|2871

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LH

60S ribosomal protein l9-like protein

Chain LO

60S ribosomal protein L16-like protein

Chain Lm

Ubiquitin-like domain-containing protein