IL_8OO0_288

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAACAAAUUA*UACAUUAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|2|G|750
8OO0|1|2|A|751
8OO0|1|2|A|752
8OO0|1|2|C|753
8OO0|1|2|A|754
8OO0|1|2|A|755
8OO0|1|2|A|756
8OO0|1|2|U|757
8OO0|1|2|U|758
8OO0|1|2|A|759
*
8OO0|1|2|U|788
8OO0|1|2|A|789
8OO0|1|2|C|790
8OO0|1|2|A|791
8OO0|1|2|U|792
8OO0|1|2|U|793
8OO0|1|2|A|794
8OO0|1|2|G|795
8OO0|1|2|C|796

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SJ

40S ribosomal protein s9-like protein

Chain SL

40S ribosomal protein S11-like protein

Chain SW

40S ribosomal protein S22-like protein