IL_8OO0_299

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGAGAG*CACUCAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|2|C|1684
8OO0|1|2|A|1685
8OO0|1|2|G|1686
8OO0|1|2|A|1687
8OO0|1|2|G|1688
8OO0|1|2|A|1689
8OO0|1|2|G|1690
*
8OO0|1|2|C|1703
8OO0|1|2|A|1704
8OO0|1|2|C|1705
8OO0|1|2|U|1706
8OO0|1|2|C|1707
8OO0|1|2|A|1708
8OO0|1|2|G|1709

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6