IL_8OPP_001

3D structure

PDB id

8OPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS

Experimental method

ELECTRON MICROSCOPY

Resolution

3.76 Å

Loop

Sequence

GU*GCC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OPP_001 not in the Motif Atlas

Geometric match to IL_4V9F_081

Geometric discrepancy: 0.2861

The information below is about IL_4V9F_081

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

8OPP|1|D|G|5
8OPP|1|D|U|6
*
8OPP|1|D|G|72
8OPP|1|D|C|73
8OPP|1|D|C|74

Current chains

Chain D

RNA (25-MER)

Nearby chains

Chain A

Terminal uridylyltransferase 7