IL_8P03_041

3D structure

PDB id

8P03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

48S late-stage initiation complex with m6A mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CCUCUCGGCGC*GCCCGAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P03|1|2|C|741
8P03|1|2|C|742
8P03|1|2|U|743
8P03|1|2|C|744
8P03|1|2|U|745
8P03|1|2|C|746
8P03|1|2|G|747
8P03|1|2|G|748
8P03|1|2|C|749
8P03|1|2|G|750
8P03|1|2|C|751
*
8P03|1|2|G|785
8P03|1|2|C|786
8P03|1|2|C|787
8P03|1|2|C|788
8P03|1|2|G|789
8P03|1|2|A|790
8P03|1|2|A|791
8P03|1|2|G|792

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S4

Chain I

40S ribosomal protein S6

Chain J

ribosomal protein eS7