IL_8P03_075
3D structure
- PDB id
- 8P03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with m6A mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8P03|1|2|A|1485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P03_075 not in the Motif Atlas
- Homologous match to IL_8C3A_458
- Geometric discrepancy: 0.1487
- The information below is about IL_8C3A_458
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 112
Unit IDs
8P03|1|2|C|1333
8P03|1|2|G|1334
*
8P03|1|2|C|1484
8P03|1|2|A|1485
8P03|1|2|G|1486
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S2
- Chain F
- Ribosomal protein S3
- Chain S
- 40S ribosomal protein uS9
- Chain W
- 40S ribosomal protein uS10
- Chain e
- 40S ribosomal protein S29
- Chain j
- Eukaryotic translation initiation factor 4C
Coloring options: