IL_8P17_177
3D structure
- PDB id
- 8P17 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UGG (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GU(5MC)AC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- 8P17|1|2|A|1492, 8P17|1|2|A|1493
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P17_177 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.4705
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8P17|1|2|G|1405
8P17|1|2|U|1406
8P17|1|2|5MC|1407
8P17|1|2|A|1408
8P17|1|2|C|1409
*
8P17|1|2|G|1491
8P17|1|2|A|1492
8P17|1|2|A|1493
8P17|1|2|G|1494
8P17|1|2|U|1495
8P17|1|2|C|1496
Current chains
- Chain 2
- 16S RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 6
- Peptide chain release factor RF2
- Chain q
- Small ribosomal subunit protein uS12
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