IL_8P18_050

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_050 not in the Motif Atlas

Homologous match to IL_7A0S_047

Geometric discrepancy: 0.2415

The information below is about IL_7A0S_047

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_06671.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

8P18|1|1|C|1319
8P18|1|1|C|1320
8P18|1|1|A|1321
8P18|1|1|A|1322
8P18|1|1|C|1323
*
8P18|1|1|G|1331
8P18|1|1|G|1332
8P18|1|1|G|1333

Current chains

Chain 1

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L22