IL_8P18_091

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

8P18|1|1|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_091 not in the Motif Atlas

Homologous match to IL_5J7L_330

Geometric discrepancy: 0.3052

The information below is about IL_5J7L_330

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

8P18|1|1|C|2129
8P18|1|1|U|2130
8P18|1|1|U|2131
8P18|1|1|U|2132
8P18|1|1|G|2133
8P18|1|1|A|2134
8P18|1|1|A|2135
8P18|1|1|G|2136
*
8P18|1|1|U|2155
8P18|1|1|G|2156
8P18|1|1|G|2157
8P18|1|1|A|2158
8P18|1|1|G|2159

Current chains

Chain 1

23S rRNA

Nearby chains