IL_8P18_200

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

(5MC)AC*GAAG

Length

7 nucleotides

Bulged bases

8P18|1|2|A|1492, 8P18|1|2|A|1493

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_200 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.1819

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

8P18|1|2|5MC|1407
8P18|1|2|A|1408
8P18|1|2|C|1409
*
8P18|1|2|G|1491
8P18|1|2|A|1492
8P18|1|2|A|1493
8P18|1|2|G|1494

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain 4

mRNA

Chain 6

Peptide chain release factor RF2

Chain q

Small ribosomal subunit protein uS12