IL_8P2F_159

3D structure

PDB id

8P2F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.44 Å

Loop

Sequence

GACAAC*GCCUUCCGGAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2F|1|a|G|1012
8P2F|1|a|A|1013
8P2F|1|a|C|1014
8P2F|1|a|A|1015
8P2F|1|a|A|1016
8P2F|1|a|C|1017
*
8P2F|1|a|G|1030
8P2F|1|a|C|1031
8P2F|1|a|C|1032
8P2F|1|a|U|1033
8P2F|1|a|U|1034
8P2F|1|a|C|1035
8P2F|1|a|C|1036
8P2F|1|a|G|1045
8P2F|1|a|G|1046
8P2F|1|a|A|1047
8P2F|1|a|C|1048

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S3

Chain o

30S ribosomal protein S14 type Z