IL_8P2G_119
3D structure
- PDB id
- 8P2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.02 Å
Loop
- Sequence
- UGA*UA
- Length
- 5 nucleotides
- Bulged bases
- 8P2G|1|a|G|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2G_119 not in the Motif Atlas
- Homologous match to IL_5J7L_001
- Geometric discrepancy: 0.0878
- The information below is about IL_5J7L_001
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
8P2G|1|a|U|31
8P2G|1|a|G|32
8P2G|1|a|A|33
*
8P2G|1|a|U|560
8P2G|1|a|A|561
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain m
- 30S ribosomal protein S12
Coloring options: