IL_8P2H_111

3D structure

PDB id

8P2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

UGGAAG*UGGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2H_111 not in the Motif Atlas

Homologous match to IL_4WF9_108

Geometric discrepancy: 0.0743

The information below is about IL_4WF9_108

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

8P2H|1|A|U|2867
8P2H|1|A|G|2868
8P2H|1|A|G|2869
8P2H|1|A|A|2870
8P2H|1|A|A|2871
8P2H|1|A|G|2872
*
8P2H|1|A|U|2885
8P2H|1|A|G|2886
8P2H|1|A|G|2887
8P2H|1|A|A|2888
8P2H|1|A|G|2889

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L17

Chain S

50S ribosomal protein L19