IL_8P2K_022
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_022 not in the Motif Atlas
- Homologous match to IL_8C3A_411
- Geometric discrepancy: 0.1897
- The information below is about IL_8C3A_411
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71854.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8P2K|1|A2|U|367
8P2K|1|A2|U|368
8P2K|1|A2|U|369
8P2K|1|A2|C|370
8P2K|1|A2|G|371
8P2K|1|A2|A|372
*
8P2K|1|A2|U|394
8P2K|1|A2|G|395
Current chains
- Chain A2
- 18s rRNA
Nearby chains
- Chain Ah
- 40S ribosomal protein S8
- Chain Ak
- 40S ribosomal protein S11
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BR
- Ribosomal protein L19
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