IL_8P2K_036

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUU(A2M)AAA*UC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2K_036 not in the Motif Atlas

Homologous match to IL_8C3A_426

Geometric discrepancy: 0.1456

The information below is about IL_8C3A_426

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.4

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

8P2K|1|A2|G|666
8P2K|1|A2|U|667
8P2K|1|A2|U|668
8P2K|1|A2|A2M|669
8P2K|1|A2|A|670
8P2K|1|A2|A|671
8P2K|1|A2|A|672
*
8P2K|1|A2|U|1162
8P2K|1|A2|C|1163

Current chains

Chain A2

18s rRNA

Nearby chains

Chain AE

eS26

Chain Ab

40S ribosomal protein S2

Chain Aw

40S ribosomal protein S23