IL_8P2K_046

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)A*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|A2|G|808
8P2K|1|A2|A|809
8P2K|1|A2|A|810
8P2K|1|A2|A|811
8P2K|1|A2|A|812
8P2K|1|A2|A|813
8P2K|1|A2|A|814
8P2K|1|A2|PSU|815
8P2K|1|A2|PSU|816
8P2K|1|A2|A|817
*
8P2K|1|A2|U|849
8P2K|1|A2|A|850
8P2K|1|A2|C|851
8P2K|1|A2|C|852
8P2K|1|A2|G|853
8P2K|1|A2|C|854
8P2K|1|A2|A|855
8P2K|1|A2|G|856
8P2K|1|A2|C|857

Current chains

Chain A2

18s rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Ai

40S ribosomal protein S9

Chain Ak

40S ribosomal protein S11

Chain Av

Ribosomal protein S15a