IL_8P2K_084

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

8P2K|1|A2|A|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|A2|G|1551
8P2K|1|A2|U|1552
8P2K|1|A2|G|1553
8P2K|1|A2|C|1554
8P2K|1|A2|C|1555
8P2K|1|A2|U|1556
8P2K|1|A2|A|1557
8P2K|1|A2|C|1558
8P2K|1|A2|C|1559
*
8P2K|1|A2|G|1578
8P2K|1|A2|U|1579
8P2K|1|A2|A|1580
8P2K|1|A2|A|1581
8P2K|1|A2|C|1582
8P2K|1|A2|C|1583

Current chains

Chain A2

18s rRNA

Nearby chains

Chain AG

40S ribosomal protein S29

Chain Ac

40S ribosomal protein S3

Chain Aj

S10_plectin domain-containing protein

Chain As

40S ribosomal protein S19

Chain At

40S ribosomal protein uS10