IL_8P2K_140

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

8P2K|1|B5|A|831, 8P2K|1|B5|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|A|726
8P2K|1|B5|A|727
8P2K|1|B5|G|728
8P2K|1|B5|G|729
*
8P2K|1|B5|C|827
8P2K|1|B5|A|828
8P2K|1|B5|G|829
8P2K|1|B5|C|830
8P2K|1|B5|A|831
8P2K|1|B5|G|832
8P2K|1|B5|C|833
8P2K|1|B5|A|834
8P2K|1|B5|G|835
8P2K|1|B5|C|836
8P2K|1|B5|U|837

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BM

60S ribosomal protein L14

Chain BS

60S ribosomal protein L18a