IL_8P2K_163

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CC(OMG)A(A2M)AG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

8P2K|1|B5|A|1605, 8P2K|1|B5|G|1609

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|C|1475
8P2K|1|B5|C|1476
8P2K|1|B5|OMG|1477
8P2K|1|B5|A|1478
8P2K|1|B5|A2M|1479
8P2K|1|B5|A|1480
8P2K|1|B5|G|1481
*
8P2K|1|B5|C|1603
8P2K|1|B5|U|1604
8P2K|1|B5|A|1605
8P2K|1|B5|G|1606
8P2K|1|B5|U|1607
8P2K|1|B5|A|1608
8P2K|1|B5|G|1609
8P2K|1|B5|C|1610
8P2K|1|B5|U|1611
8P2K|1|B5|G|1612

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BL

60S ribosomal protein L13

Chain BN

Ribosomal protein L15

Chain Ba

60S ribosomal protein L27a

Chain Bj

Ribosomal protein L37