IL_8P2K_195
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAG*CC
- Length
- 5 nucleotides
- Bulged bases
- 8P2K|1|B5|A|2143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_195 not in the Motif Atlas
- Homologous match to IL_8C3A_062
- Geometric discrepancy: 0.5367
- The information below is about IL_8C3A_062
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8P2K|1|B5|G|2142
8P2K|1|B5|A|2143
8P2K|1|B5|G|2144
*
8P2K|1|B5|C|2177
8P2K|1|B5|C|2178
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- 60S ribosomal protein L4
- Chain Be
- Ribosomal protein L32
- Chain Br
- 60S ribosomal protein L28
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