IL_8P2K_211
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CG*CGG
- Length
- 5 nucleotides
- Bulged bases
- 8P2K|1|B5|G|2554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_211 not in the Motif Atlas
- Homologous match to IL_8GLP_102
- Geometric discrepancy: 0.1996
- The information below is about IL_8GLP_102
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_28408.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 77
Unit IDs
8P2K|1|B5|C|2547
8P2K|1|B5|G|2548
*
8P2K|1|B5|C|2553
8P2K|1|B5|G|2554
8P2K|1|B5|G|2555
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BR
- Ribosomal protein L19
- Chain BU
- 60S ribosomal protein L22
- Chain BX
- Ribosomal_L23eN domain-containing protein
- Chain MA
- Methionine aminopeptidase 1
- Chain Nb
- Transcription factor BTF3
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